Numbers You Can Trust. Support That Actually Helps.
Ecommerce Bookkeeping Services That Give You Clean Numbers and Real Clarity
Take Control Of Your Ecommerce Finances With Clean, Accurate Books
Managing an ecommerce business is hard enough without trying to piece together numbers from Amazon, Shopify, Walmart, or your other sales channels. When your books aren’t accurate, every decision becomes a guess. Our ecommerce bookkeeping services give you clear, reliable financials each month so you always know where your money is going and what your store is actually earning.
At The Seller CPA, you work directly with specialists who understand the challenges of online sellers, multi-channel payouts, inventory timing, and the tax implications that come with them.
What Our Ecommerce Bookkeeping Services Deliver
Monthly Bookkeeping Services
We handle your bank and credit card reconciliations, accounts payable, and billing to keep your books current and accurate every month.
Monthly Financial Statement Presentation
You receive clean monthly financial statements that show your real performance, including true profit after fees, COGS, and refunds.
Payroll Services via Leading Providers
We coordinate payroll through trusted payroll platforms so your team gets paid on time and your compliance stays intact.
What our customers say
Explore Our Monthly Accounting Plans
Compliance
A monthly accounting and annual income tax plan ideal for clients whose primary objective is tax compliance.
Growth
A monthly accounting and annual income tax plan ideal for clients whose primary objective is tax compliance and tax reduction who don’t need advanced reporting or priority support.
Scale
A monthly tax, accounting, and advisory plan ideal for clients who want advanced reporting, priority support or who have complex inventory management needs.
Client Success Story:
How The Seller CPA Helped an Amazon + Shopify Brand Clean Up Their Books and Improve Margins
“We were selling well, but our numbers never made sense. Amazon payouts were all over the place, Shopify showed different revenue, and our inventory count was constantly off. We couldn’t tell if we were actually profitable or just moving cash around.
The Seller CPA cleaned everything up. They rebuilt our books using proper accrual accounting, fixed our COGS, and connected all our sales channels through A2X. For the first time, our numbers matched what was actually happening in the business.
Now we get clear monthly reports, CPA commentary, and insights that help us make smarter decisions. We stopped guessing our margins and finally understand our cash flow. It’s been a huge shift for us, and it feels like we’re running a real business instead of patching things together.”
— A.R., Amazon + Shopify Ecommerce Seller
Free QuickBooks Review for Ecommerce Businesses
Our CPA team will review your QuickBooks file, highlight revenue and COGS errors, and send you a personal Loom video walkthrough with fixes.
Ready To Connect With The Seller CPA?
If you are interested in becoming a new client, the best way to get in touch with us is to book an appointment for a new client intro call. Many sellers have questions about sales tax, which we do not handle as a stand-alone service. Please read this article if you have questions about sales tax.
If you are looking for a new ecommerce accounting firm and just have general questions about the services we offer and pricing, please click on the links below to read.
Free Ecommerce Bookkeeping Self-Review
In just 2 minutes, you’ll find out how healthy your books really are and where hidden risks might be costing you.
Ecommerce Accounting Specialists Who Understand How Online Sellers Operate
You work in a world where payouts are delayed, fees change without warning, and inventory moves fast. Your bookkeeping team should understand that. Our accountants and CPAs specialize in ecommerce, which means we know how Amazon, Shopify, Walmart, TikTok Shop, Etsy, and multi-channel systems actually work behind the scenes.
We focus on accuracy, consistency, and making your numbers make sense so you can make better decisions without digging through spreadsheets. If you want to learn more about our background and approach, visit our About Us page.
Stop Guessing Your Numbers. Start Running Your Store With Confidence.
When your books are accurate, everything becomes easier. You understand your margins, you know what’s working, and you can make decisions based on real data instead of estimates. Our CPA-led ecommerce bookkeeping services give you clarity, consistency, and month-to-month insights you can rely on.
Who This Service Is For
Our ecommerce bookkeeping services are built for online sellers who need clean, accurate numbers every month. If you’re selling on Amazon, Shopify, Walmart, TikTok Shop, Etsy, eBay, or across multiple channels, this service will help you stay organized and understand your true performance.
It’s a strong fit if you want reliable accrual accounting, clear monthly reporting, accurate COGS tracking, and support from a team that understands ecommerce platforms, payouts, and inventory timing. Whether you’re growing quickly or trying to get control of your books, we help you get the clarity you need to run your store with confidence.
How it Works in 4 Easy Steps
Book a 20 minute new client intro call. If it’s a good fit, we’ll schedule a deep dive discovery call to go in depth about your business and develop a scope of work tailored to your unique business needs.
After our discovery call, we’ll develop a proposal that provides flexible options. Each option is designed to align with your priorities and deliver real value.
Once you sign your proposal we’ll get started on catch up or clean up of prior periods. It doesn’t matter if you are 2 months or 2 years behind. We regularly bring messy, outdated or inaccurate books up to the most recent prior month so you know exactly where you stand.
After we bring your books up to speed, you’ll receive your monthly financial reports on a regular basis. You’ll experience a stress free tax season with no surprise tax bills. Now you can focus on scaling profitably.
Technology That Powers Your Ecommerce Accounting
Clean books rely on systems that can handle the volume and complexity of ecommerce. We use proven accounting platforms that keep your data organized, secure, and easy to review each month. These tools help streamline your bookkeeping, support accurate reporting, and make tax time less stressful.
Let’s Fix Your Books Before They Fix Your Stress Levels
Messy ecommerce books have a way of ruining your day. Lost payouts, strange fees, missing inventory, numbers that don’t add up , it’s enough to make anyone want to close the laptop and walk away. We get it. That’s why our CPA-led team steps in to clean things up and keep them that way. You get reliable monthly numbers without the chaos, so you can focus on growing your store instead of fighting your accounting.
FAQs
Who is The Seller CPA and what makes your team different?
We’re a team of accountants and CPAs who work only with ecommerce sellers. We understand multi-channel platforms, payout structures, inventory timing, and the unique tax rules that apply to online businesses. If you want to learn more about who we are, visit our About Us page.
How do I schedule a call about my ecommerce bookkeeping needs?
You can pick a time that works for you directly through our Book A Call page. Once scheduled, we’ll review your current setup and walk through the support you need.
What’s the best way to reach your team if I have questions?
You can send us a message anytime through our Contact Us page. We respond quickly and make sure your questions are sent to the right member of our accounting or CPA team.
What’s included in your ecommerce bookkeeping services?
We handle monthly reconciliations, COGS and inventory tracking, revenue matching across channels, expense categorization, and monthly CPA reviews. Everything is prepared on an accrual basis to give you accurate numbers you can rely on.
Do you also help with ecommerce tax preparation?
Yes. We prepare income tax returns for ecommerce sellers and ensure your books are aligned with your tax filings. You can learn more on our Income Tax Preparation for Ecommerce Sellers page.
Do you offer tax planning for ecommerce businesses?
Absolutely. We provide ongoing guidance to help you reduce tax surprises and plan ahead. You can see everything included on our Tax Planning for Ecommerce Businesses page.
Can you help nonresident ecommerce sellers?
Yes. We prepare U.S. income tax returns for nonresident Amazon, Shopify, and multi-channel sellers. Details are available on our Income Tax Return Preparation for Nonresident Alien Ecommerce Sellers page.
Do you review existing QuickBooks or ecommerce bookkeeping systems?
Yes. You can request a Free Ecommerce Bookkeeping Self-Review or a Free QuickBooks Review for Ecommerce Businesses to identify issues, errors, or missing data before month-end or tax season.
Do you assist with ecommerce accounting beyond bookkeeping?
We do. If you need ongoing support with accrual accounting, product-level margins, or multi-channel reporting, you can explore our broader Ecommerce Accounting & CPA Services for full support.
How are your ecommerce bookkeeping services different from a regular bookkeeper?
Most general bookkeepers don’t understand how Amazon, Shopify, or multi-channel payouts work. Our ecommerce bookkeeping services are designed specifically for online sellers. We track COGS, refunds, and platform fees accurately, reconcile every account monthly, and make sure your books reflect your true financial position across all channels.
Can you help set up bookkeeping for a new ecommerce business?
Yes. If you’re launching a new store or switching from DIY spreadsheets, we can set up bookkeeping for your ecommerce business the right way from the start. We’ll connect your sales channels, install A2X and QuickBooks Online, and build a reporting structure that grows with your store.
Do you provide ongoing support from a dedicated ecommerce bookkeeper?
Absolutely. Every client works with a dedicated ecommerce bookkeeper and CPA who know your business inside and out. You’ll receive monthly updates, video walkthroughs, and proactive guidance to help you understand your numbers and make informed decisions about inventory, cash flow, and profitability.